Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSALVGVIMGSKSDWSTLSHTADMLDKLGIPYEVKVVSAHRTPDLLFQYAEEAEGRGLEVIIAGAGGAAHLPGMCAAKTHLPVLGVPVQSSMLSGVDSLLSIVQMPAGVPVATLAIGKAGAVNAALLSASILGAKHPQYHEALKQFRANQTETVLDNPDPRDA
2FW6 Chain:B ((24-180))
---VVGIIMGSQSDWETMRHADALLTELEIPHETLIVSANRTPDRLADYARTAAERGLNVIIAGAGGAAHLPGMCAAWTRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASILALYNPALAARLETWRALQTASVPNSPIT---
General information:
TITO was launched using:
RESULT:
Template:
2FW6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126966 for 1308 contacts (-97.1/contact) +
2D Compatibility (PS) -17157 + (NN) -7419 + (LL) 492
1D Compatibility (HY) -15600 + (ID) 4900
Total energy: -171550.0 ( -131.15 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_2FW6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FW6-query.scw
PDB file :
Tito_Scwrl_2FW6.pdb
: