Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKPVCLVVAMTPKRGIGINNGLPWPHLTTDFKHFSRVTKTTPEEASRLNGWLPRKFAK-------TGDSGLPSPSVGKRFNAVVMGRKTWESMPRKFRPLVDRLNIVVSSSLKEEDIAAEKPQAEGQQRVRVCASLPAALSLLEEEYKDSVDQIFVVGGAGLYEAALSLGVASHLYITRVAREFPCDVFFPAFPGDDILSNKSTAAQAAAPAESVFVPFCPELGREKDNEATYRPIFISKTFSDNGVPYDFVVLEK
3QG2 Chain:A ((26-202))
--GKKNEVFNNYTFRGLGNKGVLPWKCISLDMKYFRAVTTYVNESKYE------KLKYKRCKYLNKET---------KKLQNVVVMGRTNWESIPKKFKPLSNRINVILSRTLKKED---------FDEDVYIINKVEDLIVLLGK---LNYYKCFILGGSVVYQEFLEKKLIKKIYFTRINSTYECDVFFPEINE-------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3QG2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70105 for 1008 contacts (-69.5/contact) +
2D Compatibility (PS) -17552 + (NN) -10765 + (LL) 4804
1D Compatibility (HY) -15200 + (ID) 2650
Total energy: -111468.0 ( -110.58 by residue)
QMean score : 0.259
(partial model without unconserved sides chains):
PDB file :
Tito_3QG2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QG2-query.scw
PDB file :
Tito_Scwrl_3QG2.pdb
: