Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSPFLRIGLSNFDCGTCQACQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINKGRVMQIIVKGKNVDLISETTVELYSLAERCRKNNGRTEIWLELKPQGRMLMNARYFLEMSDTKDMSEFENEGFFALHQRRGAIKQAKVHHVKCHEFTATFFPQPTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDKVIAKCTGSAINSRETMFHKERFKIDMPHRFKVYNYKSPTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQTKVANLCGINQKLMAEALAMIESTQQARSLRDSEHIFREGPVEIGLPCSTKNETRPPCVPTPGKREPQGISWDSPLDGSNKSAGPPEPEVSMRRTSLQLKLKIDDFILHKMLGKGSFGKVFLAEFKRT-NQFFAIKALKKDVVL-MDDDVECTMVEKRVLSL-AWEHPFLTHMFCTFQTKE-NLFFVMEYLNGGDLMYHIQSC-HKFDLSRATFYAAEVILGLQFLHSK-GIVYRDLKLDNILLD-RDGHIKIADFGMCKE---NMLGDAKTNTFCGTPDYIAPEILLGQ---KYNHSVDWWSFGVLVYEMLIG-QSPFHGQDEEELFHSIRMD------NPFYPRWLEREAKDLLVKLFVREPEKRLGVRG----DIRQHPLFREIN---WEELERKEIDPPFRPKVKSPYDCSNFDKEFLSE-KPRLSFADRALINSMDQNMFSNFSFINPGMETLICS |
| 1CDK Chain:A ((8-350)) | --------------------------------------------------------------------------------------------------------------------------------------KGSEQESVKEFLAKAKEDFLKKWENPAQNTA------H--------------------------------------------------------------------------------------------------------------------LDQFERIKTLGT--------------------------------------------------------------------------------------G--SFGRVMLVKHKETG-NHFAMKILDKQKVVK-LKQIEHTLNEKRILQAV--NFPFLVKLEYSFKDN-SNLYMVMEYVPGGEMFSHLRR-IGRFSEPHARFYAAQIVLTFEYLHS-LDLIYRDLKPENLLIDQ-QGYIQVTDFGFAKRVKG-RT-----WTLCGTPEYLAPEIILS-KGY--NKAVDWWALGVLIYEMAAGY-PPFFADQPIQIYEKIVSGKVRFPS------HFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFA---TTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVSI--------NEKCGKEFSEF------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CDK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166865 for 2464 contacts (-67.7/contact) +
2D Compatibility (PS) -33636 + (NN) -15402 + (LL) 22980
1D Compatibility (HY) -23200 + (ID) 5700
Total energy: -221823.0 ( -90.03 by residue)
QMean score : 0.234
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