Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIINTSYVEITTFFLVGMPGLEYAHIWISIPICSMYLIAILGNGTILFIIKTEPSLHEPMYYFLSMLAMSDLGLSLSSLPTVLSIFLFNAPEISSNACFAQEFFIHGFSVLESSVLLIMSFDRFLAIHNPLRYTSILTTVRVAQIGIVFSFKSMLLVLPFPFTLRNLRYCKKNQLSHSYCLHQDVMKLACSDNRIDVIYGFFGAL-CLMVDFILIAVSYTLILKTVLGIAS-----------KKEQLKALNTCVSHICAVIIFYLPIINLAVVHRFARHV--SP--LINVLMANVLLLVPPLTNPIVYCVKTKQIRVRVVAKLCQRKI |
| 2KS9 Chain:A ((35-324)) | ----------------------------WAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPRLSATAT--KVVICVIWVLALLLAFPQGYYSTT-ET----MPSRVVCMIEWPEHP---NKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KS9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -225701 for 2145 contacts (-105.2/contact) +
2D Compatibility (PS) -28037 + (NN) -10278 + (LL) 3248
1D Compatibility (HY) -21600 + (ID) 2250
Total energy: -284618.0 ( -132.69 by residue)
QMean score : 0.231
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