Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNHMSASLKISNSSKFQVSEFILLGFPGIHSWQHWLSLPLALLYLSALAANTLILIIIWQNPSLQQPMYIFLGILCMVDMGLATTIIPKILAIFWFDAKVISLPECFAQIYAIHFFVGMESGILLCMAFDRYVAICHPLRYPSIVTSSLILKATLFMVLRNGLFVTPVPVLAAQRDYCSKNEIEHCLCSNLGVTSLACDDRRPNSICQLVLAWLGMGSDLSLIILSYILILYSVLRLNS--------AEAAAKALSTCSSHLTLILFFYTIVVVISVTHLTEMK--ATLIPVLLNVLHNIIPPSLNPTVYALQTKELRAAFQKVLFALTKEIRS |
| 1U19 Chain:A ((38-327)) | ------------------------------WQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF-GENHAIMGVAFTWVMALACAAPPLVGWSRYIP----EGMQCSCGIDYYTP---HEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGD |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1U19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -225653 for 2262 contacts (-99.8/contact) +
2D Compatibility (PS) -28215 + (NN) -959 + (LL) 2496
1D Compatibility (HY) -4000 + (ID) 750
Total energy: -257081.0 ( -113.65 by residue)
QMean score : 0.159
|
|
|