Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSMNNSKQLVSPAAALLSNTTCQTENRLSVFFSVIFMTVGILSNSLAIAILMKAYQRFRQKSKASFLLLASGLVITDFFGHLINGAIAVFVYASDKEWIRFDQSNVLCSIFGICMVFSGLCPLLLGSVMAIERCIGVTKPIFHSTKITSKHVKMMLSGVCLFAVFIALLPILGHRDYKIQASRTWCFYNTEDIKD-WED-RFYLLLFSFLGLLALGVSLLCNAITGITLLRVKFKSQQ---HRQGRSHHLEMVIQLLAIMCVSCICWSPFLVTMANIGINGNH--SLETCETTLFALRMATWNQILDPWVYILLRKAVLKNLYKLASQCCGVHVISLHIWELSSIKNSLKVAAISESPVAEKSAST |
| 2KS9 Chain:A ((32-326)) | -------------------------IVLWAAAYTVIVVTSVVGNVVVMWIILAHK-----RMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVH-NEWYY---GLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPRL--SATATKVVICVIWVLALLLAFPQGYY-STTETMPSRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFISAGDYEGLEMKSTRYLQTQGSVYKVSRLETTIST |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KS9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -230816 for 2253 contacts (-102.4/contact) +
2D Compatibility (PS) -29273 + (NN) -13799 + (LL) 2680
1D Compatibility (HY) -21200 + (ID) 2000
Total energy: -294408.0 ( -130.67 by residue)
QMean score : 0.377
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