Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMSFLHIVFSILVVVAFILGNFANGFIALINFIAWVKRQKISSADQIIAALAVSRVGLLWVILLHWYSTVLNPTSSNLKVIIFISNAWAVTNHFSIWLATSLSIFYLLKIVNFSRLIFHHLKRKAKSVVLVIVLGSLFFLVCHLVMKHTYINVWTEECEGNVTWKIKLRNAMHLSNLTVAMLANLIPFTLTLI---------------SFLLLIYSLCKHLKKMQLHGKGSQDPSTKIHIKALQTVTSF-----LILLAIY-FLCLIISFWNFKMRPKEIVLMLCQAFGIIYPSFHSFILIWGNKTLKQTFL-SVLWQVTCWAKGQNQSTP |
| 4XGC Chain:A ((38-388)) | ----PCREREFENIYAFLEGKIQDQCMYVSGVPGTGKTATVTGVIRTLQE-YLEINGMRLTEPRQAYVQIYKQLTGK-------TVSWEQAHALLEKRTTVLLVDELDILCNRRQDVVYNLLDWPTKLVVVTIANTMDLPERLGLTRLTFQPYSHKQLQEIVTARLGKGEAVQLVARKVAAVSGDARRALDICRRATEIADTAAVKCVTMLHVQQALAEMIASAKVQAIRNCSRMEQIFLQAIAAEVTRTGVEETTFMGVYQQVETIAAFMGVTFPPPGRALRLCSKLGA----ERLIISEHSRNDLFQKILLNVSADDIHYALRV----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -271723 for 2153 contacts (-126.2/contact) +
2D Compatibility (PS) -29927 + (NN) -1675 + (LL) 1924
1D Compatibility (HY) -3200 + (ID) 2000
Total energy: -306601.0 ( -142.41 by residue)
QMean score : 0.186
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