Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MITFLPIIFSILIVVTFVIGNFANGFIALVNSIEWFKRQKISFADQILTALAVSRVGLLWVLVLNWYATELN-PAFNSIEVRITAYNVWAVINHFSNWLATS------------LSIFYLLKIANFSNLIFLHLKRRVKSVVLVILLGPL-------LFLVCH---LFVINMNQIIWTKEYEGN-----MTWKIKLRSAMYLSNTTVTILANLVPFTL--TLISFLLLICSLCKHLKKMQLHGKGSQDPSMKVHIKALQTVTSFLLLCAIYFLSIIMSVWSFESLENKPVFMFCEAIAFSYPSTHPFILI---WGNKKLKQTFLSVLWHVRYWVKGEKPSSS------------------------------------------------ |
| 4QUV Chain:A ((23-427)) | FSWLVLMIALPPLVYYLWICVTYYQGELVFTSDAAAWRRFWSHVAPPTWHAAGLYAAWFLGQAALQVWAPGPTVQGMKLPDGSRLDYRMNGIFSFLFTLAVVFGLVTMGWLDATVLYDQLGPLLTVVNIFTFVFAGFLYFWGPFYDYFMGTALNPRIGSLDLKLFCEARPGMIFWLLMNLSMAAKQYELHGTVTVPMLLVVGFQSFYLIDYFIHEEAVLTTWDIKHEKFGWMLCWGDLVWLPFTYTLQAQYLVHHTHDLPVWGIIAIVALNLAGYAIFRGANIQKHHFRRDPNRIVW---GKPAKYIKTKQGSLLLTSGWWGIARHMNYFGDLMIALSWCLPAAFGSPIPYFHIVYFTILLLHREKRDDAMCLAKYGEDWLQYRKKVPWRIVPKIY |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QUV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -195870 for 2101 contacts (-93.2/contact) +
2D Compatibility (PS) -31730 + (NN) -12030 + (LL) 396
1D Compatibility (HY) -14400 + (ID) 2450
Total energy: -256084.0 ( -121.89 by residue)
QMean score : 0.176
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