Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSAGLGLLMLVAVVEFLIGLIGNGSLVVWSFREWIRKFNWSSYNLIILGLAGCRFLLQWLIILDLSLFP---LFQSSRWLRYLSIFWVLVSQASLWFATFLSVFYCKKITTFDRPAYLWLKQRAYNLSLWCLLGYFIINLLLTVQIGLTFY--HP-P--QGNSSIRYPF--ES-WQ---YLYAFQLNSGSYLPLVVFLVSSGMLIVSLYTHHKKMKVHSAGRRDVRAKAHITALKSLGCFLLLHLVYIMASPFSITSKTY-P----------PD--LTSVFIWETLMAAYPSLHSLILIMGIPRVKQTCQKILWKTVCARRCWGP |
| 2LNL Chain:A ((38-322)) | ----NKYVVIIAYALVFLLSLLGNSLVMLVILYS---RVGRSVTDVYLLNLALADLLFALTLP-IWAASKVNGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATR-TL--TQKR--HLV----KFVCLGCWGLSMNLSLPFFLFRQAYHPNNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAH--------------MGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHG-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -197170 for 1856 contacts (-106.2/contact) +
2D Compatibility (PS) -25701 + (NN) -4841 + (LL) 3980
1D Compatibility (HY) -25200 + (ID) 2100
Total energy: -251032.0 ( -135.25 by residue)
QMean score : 0.198
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