Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASKDFAIGMILLSQIMVGFLGNFFLLYHYSFLCFTRGMLQSTD--LILKHLTIANSLVILS----KGIPQTMAAFGLKDSLSDIGCKFVFY---------VHRVG-RAVCVGNACLLSVFQVITISPSEFRWAELKLHAHKYIRS-FILVLCWILNTLVNITVLLHVTGKWNSINSTKTNDYGYCSGGSRSRIPHSLHIVLLSSLDVLCLGLMTLA----SGSMVFILHRHKQQVQHIHGTNLSARSSPESRVTQSILVLVSTLCYFTRS-PPSLHMSLFPNP----SWWLLNTSALITACFPMVSPF----VLMSRHPRIPRLGSACCGRNPQFPKLVR----------- |
| 4V36 Chain:A ((8-335)) | -KEIGEEPDPEKLEAFLEEKGGN--ALSHLGFL-GDKRFFYSSDGNALIQFAKVGQRLVVLGDPSGREDSFPLVIKEFLHAADQKGYLVIFYQIEREDMALYHDFGYRFFKLGEEAIVDLD---TFTISGKKRAGLRAIYNRFEREGYTFHVEQPPFSREFLNELRQVSDEWLGRKKEKGFSLGFFQEDYLQKAP----IAVLKSEEGEIVAFMNIMPMYREGEISIDLMRYS----------------KKAPKGIMDALFIYLFQWGKEQGYTAFNMGMAPLSNVGTSFWTERLAAVIFNNVSYMYSFSGLRSFKEKYKPVWRGKYLAYRKNRSLPVTMILVTRLIGRRTK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4V36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -217672 for 2079 contacts (-104.7/contact) +
2D Compatibility (PS) -30206 + (NN) -4340 + (LL) 2260
1D Compatibility (HY) -7600 + (ID) 2350
Total energy: -259908.0 ( -125.02 by residue)
QMean score : 0.217
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