Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MECKLVNLSNNDVGTTQLNPLIFSVEQKLSILHDIVRWQLAKRRA--GTHKVKGISDVSGTTAKPYSQKRTGRARQGSLRSPQFRGGGVIFGPIV-RSHAYSLNKKVRKFGLKVALSLKYLNNQV-------------IILNNLNINVKKTSEMCKYIQNFKFSSFLIVGD-------------------------YEDSLLRAARNLHYVNLIKPIGLNVFDILNHE----CIMLTSDALRYLEGRLL |
| 1JJ2 Chain:C ((1-246)) | MQATIYDLDGNTDGEVDL-PDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPKLDGRARRVPQAVKGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATADADLVADRGHEFDRDEVPVVVSDDFEDLVKTQEVVSLLEALDVHADIDRADETKIKAGQGSARGRKYRRPASILFVTSDEPSTAARNLAGADVATASEVNTEDLAPGGAPGRLTVFTESALAEVAER-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JJ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88423 for 1355 contacts (-65.3/contact) +
2D Compatibility (PS) -21135 + (NN) -5054 + (LL) 272
1D Compatibility (HY) 400 + (ID) 2100
Total energy: -116040.0 ( -85.64 by residue)
QMean score : 0.325
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