Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLAIKTRVKTAKGRKLSSTRWLHRHLNDQYVQKTNKDSYRSRSAYKLIEIDNKFKLLQAGQKIVDLGASPGGWSQVASQK--GVKVVAIDIKPV-NTI--------SGVKYIQYDINE-LETLRERFKDQKFDVILSDMAPESCGLKSLDHIRIMLLCEAALNFAKHFLNYGGKFVVKIFQGESD--KDFYNELKKMFKIVKYFKPKSSRSESTEMYLVGLGFISNSFPI |
| 2P41 Chain:A ((80-232)) | --------------------------------------------------------VTPEGKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFF--I----PPERCDTLLCDIGES-SPNPTVEAG----RTLRVLNLVENWLSNNTQFCVKVLNPYMSSVIEKMEALQRKHG-GALVRNPLSRNSTHEMYWVSNASGNIVSSV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P41.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61113 for 1048 contacts (-58.3/contact) +
2D Compatibility (PS) -15041 + (NN) -3268 + (LL) 5748
1D Compatibility (HY) -6400 + (ID) 1350
Total energy: -81424.0 ( -77.69 by residue)
QMean score : 0.439
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