Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHQTIRVNH---AGEYGAICIYYGQKFILKK----SSIINKIIEMEGQEKKHFHYFNGKIKEQ-----------KVRPTVLL----P-----------------------VWYVLGVSLGVITAIMGK-KAAMACTAAVEEVIGEHYREQVSYLEDGELKEIISKFCNEELEHRDIAIEHNAESALGYNILSSFVKTGCKVAIYLSKLI |
| 2V8T Chain:A ((24-194)) | --AAVQALLGGRFGEMSTLMNYMYQSFNFRGKKALKPYYDLIANIATEELGHIELVAATINSLLAKNPGKDLEEGVDPASTPLGFAKDVRNAAHFIAGGANSLVMGAMGEHWNGEYVFTS-----GNLILDLLH-NFFLEVAARTHKLRVYEMTDNPVAREMIGYLLVRGGVHAAAYGKALESLTGVEMTKMLPIPKIDNSKIPEAKKY |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V8T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26286 for 866 contacts (-30.4/contact) +
2D Compatibility (PS) -12884 + (NN) 293 + (LL) 1104
1D Compatibility (HY) -2400 + (ID) 900
Total energy: -41073.0 ( -47.43 by residue)
QMean score : 0.403
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