Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MINQVYQLV--APRQFDVTYNNVD-IYGNHVIVRPLYLSICAADQRYYTGRRDENVLRKKLPMSLVHEAVGEVVFDSKG--VFEKGTKVVMVPNTPTEQHHIIAENYLASSYFRSSGYDGFMQDYVVMAHDRIVPLPNDIDLSTIS-YTELVSVSYHAIQRFERKSIPLKNSFGIWGDGNLGYITAILLRKLYPEAKIYVFGKTDYKLSHFS--FVDDIFTVN---------QIPDDLKIDHAFECVGGKGSQVALQQIVEHISPEGSIALLGVSEL-PVEVNTRLVLEKGLTLIGSSRSGSKDFEQVVDLYRKYPDIVEKLALLKGHEINVCTMQDIVQAFEMDLSTSWGKTVLKWTI |
3UOG Chain:A ((26-363)) | KWMQEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGL---DLAFPFVPASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGH--LRAGDRVVVQGTGGVALFGLQIAKA-TG-AEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAGG----AGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRALEDLVGAVD-RL----GLKPVIDMRY---KFTEVPEALAHLDRGPFGKVVIEF-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UOG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205355 for 2827 contacts (-72.6/contact) +
2D Compatibility (PS) -34407 + (NN) -9554 + (LL) 1500
1D Compatibility (HY) -4800 + (ID) 2950
Total energy: -255566.0 ( -90.40 by residue)
QMean score : 0.365
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