Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVPDRRVSKTRAAKRRTHYSVKLAKPV-KAKDGT-WKLPHHINKFTKEY
3IRB Chain:A ((45-69))
------------------------IIGSKCSKCGRIFVPARSYCEHCFVK
General information:
TITO was launched using:
RESULT:
Template:
3IRB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6492 for 103 contacts (63.0/contact) +
2D Compatibility (PS) -2350 + (NN) 521 + (LL) 2052
1D Compatibility (HY) 400 + (ID) 100
Total energy: 7015.0 ( 68.11 by residue)
QMean score : 0.180
(partial model without unconserved sides chains):
PDB file :
Tito_3IRB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IRB-query.scw
PDB file :
Tito_Scwrl_3IRB.pdb
: