Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------------------MSVLKLHVKAFR-FETNKDYNPAYESYFLEY-QEDQYLLDLLKQLKGVSYNENIALKINQIA-VFEDAKVSD---LVAFFSKEWVLDPLSKRYALKD--------------------LMIDEKEVLKNYEDFFKQV-PYIT-KGEKEELEKFIQINFINPQTNPKYLGDGFFLYVKWLMKRYPTERNRLLEMIS-KPESGVMNFLSVAHYLYKNDDN----IDHEIYELQEMLT-NSKIKPWKDFSKNLLSLFQYNSNPPKTPNPPKTCALFNAYAKHLNAQALLKSAKLYLERMGQKVIDLPFCYDGGYYGKIISTHDFLTACAYNLALAKANGVSLIFCEEDSYLNILHAKEVLDN-NP-EIIDSVNEKLKKYQLVYEKGVEVVYLNEWVNEFLAWELKSPFDAFLGAEFSRIKPSDH-----FFNKIHLK----APHFLESFQNYAPLLEVNEVSGLLQCAHLRYLGIDLGADFLIV-------HSLGLFHAFENL---SLKASKIYKRDN---------------------------------------------DNTPTLFLPQIALMAM-GEKNKQTLGLDAHYHKVTFI--------------------- |
| 1YVU Chain:A ((4-706)) | EALLNLYRIEYRPKDTTFTVFKPTHEIQKEKLNKVRWRVFLQTGLPTFRREDEFWCAGKVEKDTLYLTLSNGEIVELKRVGEEEFRGFQNERECQELFRDFLTKTKVKDKFISDFYKKFRDKITVQGKNRKIALIPEVNEKVLKSEEGYFLLHLDLKFRIQPFETLQTLLERNDFNPKRIRVKPIGIDFVGRVQDVFKAKEKGEEFFRLCMERSTHKSSKKAWEELLKNRELREKAFLVVLEKGYTYPATILKPVLTYERNEVADIVRMEPGKRLNLIRYILRRYVKALRDYGWYISPEEERAKGKLNFKDTVLDAKGKNTKVITNLRKFLELCRPFVKKDVLSVEIISVSVWRKEEFLKELINFLKNKG---IKLKIKGKSLILAQTREEAKEKLIPVIN----KIKDVDLVIVFLEFLLYDFVKRELLKKMIPSQVILNRTLKNENLKFVLLNVAEQVLAKTGNIPYKLKEIEGKVDAFVGIDISRITRDGKTVNAVAFTKIFNSKGELVRYYLTSYPAFGEKLTEKAIGDVF--SLLEKLGFKKGSKIVVHRDGRLYRDEVAAFKKYGELYGYSLELLEIIKRNNPRFFSNEKFIKGYFYKLSEDSVILATYNQVYEGTHQPIKVRKVYGELPVEVLCSQILSLTLMNYSSFQPIKLPATVHYSDKITKLMLRGIEPIKKEGDIMYWL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YVU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86172 for 3272 contacts (-26.3/contact) +
2D Compatibility (PS) -50488 + (NN) 32 + (LL) 1192
1D Compatibility (HY) -21200 + (ID) 4300
Total energy: -160936.0 ( -49.19 by residue)
QMean score : 0.212
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