Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYIDDGLENQTILITGGAGFVGSNLAFYFQENHPKA------KVVVLDKFRSNTLSSNNRPSSLGHFKNL-IGFKGEVIIADINNPLDLRRLEKLHFDYLFHQAAVSDTTM--LNQELVMKTNYQAFLNLLEIARSKKA-KVIYASSAGVYGNTKAPNIVG--SNESPENVYGFSKLCMDEFVLSHS-S--DNVVGLRYFNVYGSREFYKEKTASMVLQLALSAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKA-QKSGVYNVGYSQARSYNEIVSILKEHLGDFKVS-YIKNPYTF-FQKHTQAHIEPTILDLDYTPLYDLESGIKDYLPHIHAIFKEQHA |
| 1R6D Chain:A ((1-315)) | ----------MRLLVTGGAGFIGSHFVRQLLAG--AYPDVPADEVIVLDSLTYAGN-----RA---NLAPVDADPRLRFVHGDIRDAGLLARELR-GVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPL-EPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE----KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLG-ADWSSVRKVADRKGHDLRYSLDGGKIERELGYRPQVSFADGLARTVRWYRENRGWWEP |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1R6D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -149879 for 2564 contacts (-58.5/contact) +
2D Compatibility (PS) -31905 + (NN) -13122 + (LL) 812
1D Compatibility (HY) -5600 + (ID) 3050
Total energy: -202744.0 ( -79.07 by residue)
QMean score : 0.493
|
|
|