Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQDFSSLLLKLQEYWKDQGCLVIQPYDIPAGAGTFHPATLLRSLDKKPWNVAYVAPSRRPTDGRYGENP---NRLGSYYQFQ--VVIKPSP-------SNIQELYLKSLEVLGINLNEHDIRFVEDNWESPTLGAW---GLGWEVWLDGMEVTQFTYFQQVGGIPCSPIPVEITYGLERLTMYVQKVENILEIEWAKKDNESVRYAQVHLESEYEFSKYHFEVASVERLLEMFKNAQAEALHCLENKLPLPAYDLVMLCSHFFNILDARKAISVAERQNYILQIRDLAKGCAVLYKEQEEEREERLKNALTKA |
| 3VBB Chain:A ((290-386)) | ----------------------------------------------LPIKYAGLSTCFRQEVGS----TRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIP-----YHIVNIV--SGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTMDKVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFMPPGLQELIPFVKPAPI---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VBB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7372 for 314 contacts (-23.5/contact) +
2D Compatibility (PS) -8841 + (NN) -7702 + (LL) 9948
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -18817.0 ( -59.93 by residue)
QMean score : 0.187
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