Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------MAVSSINQFDSNLYGLLNAKSAPKEDLAPIEGAEKIEREKK--DAPTENLPFNPDKRETYGF-LVLELMSDREYEAFLRA----------TAGMDESQKRLAAQSLYSLTDFYNGKFSKEVENAPKQPVNGLHKKAFQTFNATNHNAFLQRYQNAYNNPSSM----DVVL---------------- |
| 3L4B Chain:C ((1-216)) | MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDEVNLFIAQLVMKDFGVKRVVSLVNDPGNMEIFKKMGITTVLNLTTLITNTVEALIFPDEFSSIIPLEQGIEFLSVNVEEDSPVVGKKLKDLPLPRDSIIAAIVRGGVLVVPRGDTEILSGDKLYVIVSAEAKETVEETLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L4B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 43252 for 847 contacts (51.1/contact) +
2D Compatibility (PS) -15590 + (NN) 742 + (LL) 0
1D Compatibility (HY) -4000 + (ID) 900
Total energy: 23504.0 ( 27.75 by residue)
QMean score : 0.081
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