Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKISLNSNKRAWMWWFQGVIFLNPKIVSWLLKAYRMSDNLLHKDIQALIARLKHQDLNLSALEKSLSRLIHDEINLEYLKACGLNFVETSENLITLKNLKTPLKDEVFSFVDLETTGSCPLKHEILEIGAVQVK-----------------GGEIINRFETLVKV-KSVPDYIAELTGITYEDTL--NAPSAHEALQE-LRIFLGN----SVFVAHNA-NFDYNFLGRYFVEKLHCPL--LNLKLCTLDLSKR-AI--LSMRYSLSFLKELLGFG-IEVSHRAYADALASYKLFEICLLNLPSYIKTTMDLIDFSKCANTLIKRPPRAKYQEIPSPFPLFERTKGLLDIMKATS |
| 3U3Y Chain:B ((10-215)) | --------------------------------------------------------------------------------------------------------HMQTLIFLDLEATGLPSSRPEVTELCLLAVHRRALENISQGHPPPVPRPPRVVDKLSLCIAPGKACSPGASEITGLSKAELEVQGRQRFDDNLAILLRAFLQRQPQPCCLVAHNGDRYDFPLLQTELARLSTPSPLDGTFCVDSIAALKALEQAS-RKSYSLGSIYTRLYWQAPTDSHTAEGHVLTLLSICQWKPQALLQWVDEHARPFSTVKPMYG---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U3Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82492 for 1240 contacts (-66.5/contact) +
2D Compatibility (PS) -18085 + (NN) -5447 + (LL) 11188
1D Compatibility (HY) -5600 + (ID) 1700
Total energy: -102136.0 ( -82.37 by residue)
QMean score : 0.365
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