Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MKK---FLSILSILVLALLVTACGSDSSDKKSAKKEEKMETVTYIADINGAKL-EATFSHVGDNLRKVDQKMVYP-----LTALGLESGANLDDATKKQLEEQVASQYSAYKESKGASLETKFTDEALELTMSVDLYKADKDSVASLL-----------GGTTDPKNVSLKETVKQF-EAQGFKKKES- |
| 4OMV Chain:A ((3-205)) | AMLLYTKKDDIYSDIVRMILLIKGANAKIVDVSKEENSKHLEELNIITPNGNIPTLSTDDFAVYRLSVIIEAIEDLYPFPPMFPVFPKQRANARILLEYVNKTFLQNIIKLQSPDLDEKQANEIKMLMQRDIISTYKKIVSERAQNINVLTLIITFVFYYFIKLKISIPTKDKNIIKEIKELLSEPNFIKTIKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OMV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2373 for 1034 contacts (2.3/contact) +
2D Compatibility (PS) -17587 + (NN) -8844 + (LL) 0
1D Compatibility (HY) -5600 + (ID) 1200
Total energy: -30858.0 ( -29.84 by residue)
QMean score : 0.342
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