Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLTLKGKYNEAKVFTDNVDDNTIGQIITLCNQPFAKDSKIRIMPDTHGGKGCVIGTTMTIQDKIVPNLVGVDIGCGLYVVKLKPGKLKMDFDKLDKVIRERVPSGSKTHDKPVDEFDLEGIVAPIHHGWVARSIGTLGGGNHFIEVNQGSDGIYLVIHSGSRV-LGKEIAEYHQEVAYKRLDILRKELKLDATAAKKRGNLEMANNLNGERE---QVKLDYDLSYVTGVDLKNYLNDMEIAQKFAARNRYVMAQIILKAMKWDKAVVSAFDCVHNYIDIEHNMLRKGATSAQLGEQIIVPLNMREGSILATGKGNADWNYSAPHGAGRMLSRSKAKAQISLESYQAAMKDVWTTSVSKKTIDEAPKAYKSAKQLLADVEDTMEIQEIIKPLYNFKA |
1DVG Chain:A ((10-223)) | ------------------------------------------------------------------------------------------------------------------------------------------SQDLSEALKEATKEVHIRAENSEF-MRNFQKGQVSREGFKLVTASLYHIYTALEEEIERNKQNPVYAPLYFPEELHRRAALEQDLAFWYGPHWQEAIPYTPATQHYVKRLHEVGGT--------HPELLVAHAYTRYLGDLSGGQVLKKIAQKALA-------------LPSSGEGLASFTFPSIDNPTKFKQLYRARMNTLELT----------PEVKHRVTEEAKTAFLLNIELFEELQALLTE------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DVG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 23280 for 1612 contacts (14.4/contact) +
2D Compatibility (PS) -22401 + (NN) -7724 + (LL) 11708
1D Compatibility (HY) -800 + (ID) 1200
Total energy: 2863.0 ( 1.78 by residue)
QMean score : 0.258
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