Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MAYPFNHKEFVAMMEQYNLKS--NSITIPEHTILNDLVTE--NRDCVYLLKSG-----ILAGYIDFDNDKIYSIFTSNFF----MGYYTIFDNSSLVL-TYQTLT-------ECELI-----------IYKKKDIEYSLSLFPENFSFQYTI------MRTIAKHGYYKSLLQYRDK-KDQLAFVFEML-------VKILDIPVEDGVAVLPKSIST--TVIKNYCTLSKAFFYSQLKELKEAGIISKVKLQWR---INMEALSEKNNSIN---------------------------------------- |
| 4Q4D Chain:A ((7-323)) | QIVVGICSMAKKSKSKPMKEILERISLFKYITVVVFEEEVILNEPVENWPLCDCLISFHSKGFPLDKAVAYAKLRNPFVINDLNMQYLIQDRREVYSILQAEGILLPRYAILNRDPNNPKECNLIEGEDHVEVNGEVFQKPFVEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSVYSPESNVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERD--SEGKEVRYPVILNAREKLIAWKVCLAFKQTVCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDDCAKILGNIVMRELAPQFHIPWS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q4D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59648 for 1351 contacts (-44.2/contact) +
2D Compatibility (PS) -22978 + (NN) 2324 + (LL) 148
1D Compatibility (HY) -13600 + (ID) 2450
Total energy: -96204.0 ( -71.21 by residue)
QMean score : 0.166
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