Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKGILNVLLVFALIAGLSVPSSMQVEAAAPTIKVHFIDVGQG------------------------DAIYIKAP----SGEDILIDAGNKGKGKTVVNYLKKLKVKDIEIMIASHSDADNIGGLPEVMNNI----KVKNLYAPKSTNTTAAYKNFVNTA--------KKKKLTIKTAKAGVKLPVK----GVNAQFVGPVKTYGKTDRNNWSAVLHVAYKKNTFLFTGDAQTKAENDMIKAKKTLRADVLKVS-----TQGSKAA--TSKAFVNVVKPKYAIISVGKNGYGHPTSQTVNTLKKAKAKVYRTDRNKTVVVTGNGSSYSIGK |
| 3MD7 Chain:A ((24-291)) | ---------------------------SPRNCLRFTLLGCGSSPGVPRINGDWGKCDPKNPKNRRRRASLLVERYDAEGNNTVVVIDTGPDF-----RMQMIDSGVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRN--RLYDTFGYCFETPVGSSYPPILSMHDIAPETPFSIEGAGGAIRFEPFSQVHGD------IESLGFRIG----SVVYCTDVSAFPEQ-SLQ--YIKDADVLIIGALQYRPHPSHFSLGEALEWIEKLSPKRAILTHMHVPLD--YET----VMR--------ETPHHVEPGYDGLRFEV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MD7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65429 for 1786 contacts (-36.6/contact) +
2D Compatibility (PS) -22963 + (NN) -1409 + (LL) 4016
1D Compatibility (HY) -12400 + (ID) 1450
Total energy: -99635.0 ( -55.79 by residue)
QMean score : 0.458
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