Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKLTKGLGILLASSLVLGLAACGGGSDDKALSTEKITIGTTAGPH-QQIAEEVQKLAKKDGLEIKIKTFDDYNTPNTALNDGDLDANNYQTIPFLEQQKKDKGYKLDVAFKTVAFPMGIYSNDIKDLKNLKKGDKIAVPNDPSNEYRGLKLFEDAGVIKLKDGVEE-KATKKDIAENPLDLEIVELEASQIPAQLDEVAAAAINTNFAMGAGLSINKDAIYHEPTKDNPYPNVFVVRSANKDDEVVKTLEKYYHSDEVKAFIEKEFNGSVVPAF |
3IR1 Chain:C ((1-237)) | ----------------------------------KEIVFGTTVGDFGDMVKEQIQPELEKKGYTVKLVEFTDYVRPNLALAEGELDINVFQHKPYLDDFKKEHNLDITEVFQVPTAPLGLYPGKLKSLEEVKDGSTVSAPNDPSNFARVLVMLDELGWIKLKDGINPLTASKADIAENLKNIKIVELEAAQLPRSRADVDFAVVNGNYAISSGMKLT-EALFQEPS--FAYVNWSAVKTADKDSQWLKDVTEAYNSDAFKAYAHKRFEGYKSPA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IR1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38366 for 1959 contacts (-19.6/contact) +
2D Compatibility (PS) -25393 + (NN) -12631 + (LL) 1892
1D Compatibility (HY) -16000 + (ID) 4500
Total energy: -94998.0 ( -48.49 by residue)
QMean score : 0.526
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