Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MKFLKKYGFYFLLLGVLSDFL-----TPYIL---GIFYPELNQMTRVMSVFGDVTSPV------RGAFLVWSVVS-GVFFVLALPAIYQSVVKTSRTLAI-LLASAIGLYGIGDCIFTGLF-SI------DTEQASWTFSTWVH----NIGSGLGYAGFLIFP--LFLVILYRKTGDKTRS--------NIYLVLLIVSLLSAGVYGLARIPAVNDLPVL------DKIGFCQRISFFFNYLPIVVFGIDRIRKP |
| 3U4T Chain:A ((230-487)) | VEFRYADFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYNKEYVKADSSFVKVLELKPNIYIGYLWRARANAAQDPDTKQGLAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYTINRDKVKADAAWKNILALDPTNKKAIDGLK-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3U4T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -172382 for 1468 contacts (-117.4/contact) +
2D Compatibility (PS) -20535 + (NN) -2468 + (LL) 304
1D Compatibility (HY) 1600 + (ID) 1300
Total energy: -194781.0 ( -132.68 by residue)
QMean score : 0.205
|
|
|