Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKLIIDADDFGLSKAINHGIIESYKTGITTSTLLMPNLETAEHAIALAKNHPDLFIGQHTNFLLGKPCANPAEIPSLVDENGEFHRSKYYRANPELKFQYEDVRTETIAQMERFKALTGHYPEHIDCHSIGDETVDQAFFDIAREFGIHTTLKYSGDKKWSDQEGYLPITKLLESGALPYTNGGVSVENFLNDDFGLLKLAPNEIAEMHFDVGFLDQFVLDNSSYTLMRCRELATICDVRVRDWLLENGFELITFGDLQR |
| 2NLY Chain:A ((3-226)) | MKRAAIIIDDFGGDVKGVDDFL---TGEIPVTVAVMPFLEHSTKQAEIAQA-------AGLEVIVHMPLEPKPSGIT----------------SNLSVGEVKSRVRKAFDDIPYAVGLNNH----MGSKIVENEKIMRAILEVVKEKNAFIIDSGTSPHS--------LIPQLAEELEVPYATRSIFLDNTHSSRKEVIKNMRKLAKKAKQGSEPIGIGHVGVRGDETYAG-------IRSMLDEFQAESIQLVPVSQLLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NLY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56826 for 1896 contacts (-30.0/contact) +
2D Compatibility (PS) -23284 + (NN) -6416 + (LL) 2632
1D Compatibility (HY) -3200 + (ID) 1400
Total energy: -88494.0 ( -46.67 by residue)
QMean score : 0.419
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