Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----LKKLTVGGKFDWYIDTLEKSGMFI--LELSNEEIETFIFED---FIVGVTSFFS-KNNLSEL-KANEIIDE----DMEKNAYLL-REKVLKIDNTDLWNINSVRQSSEWLD----IFRRSDELKRQLKERWSDEEIE-YLKTL
3E0K Chain:A ((3-150))
AEQVRQAGIDDIGGILELIHPLEEQGILRRSREQLEQEIGKFTIIEKDGLIIGCAALYPYSEERKAEMACVAIHPDYRDGNRGLLLLNYMKHRSKSENINQIFVLTT--HSLHWFREQGFYEVGVDYLPGAKQGLYNFRKSKILALDL
General information:
TITO was launched using:
RESULT:
Template:
3E0K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6464 for 724 contacts (-8.9/contact) +
2D Compatibility (PS) -12725 + (NN) -1208 + (LL) 292
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -24955.0 ( -34.47 by residue)
QMean score : 0.241
(partial model without unconserved sides chains):
PDB file :
Tito_3E0K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E0K-query.scw
PDB file :
Tito_Scwrl_3E0K.pdb
: