Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGRKWANIKEKKASKDKTNSRIYAKFGIEIYVAAKSGDPDPHSNQKLRFVIERAKTYNVPKHIIDRAIEKAKGTGDETYSELRYEGFGPNGSMIIVDALTNNVNRTASDVRAAYSKNGGNMGVSGSVAYMFDNTAIFGVEGKDADELLELLMEADIDVRDILDEDGQAIIYAEPEDFHKVQEGLKAAGIEEFTVAEIEMIPQ-N--DIQLSGEDLEKFERLIDALEDLEDVQKVYHNVELED |
| 2KO1 Chain:A ((16-77)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------NGMTNQITGVISKFD-TNIRTIVLNAKDGIFTCNLMIFVKNTDKLTTLMDKLRKVQGVFTVER------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KO1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8698 for 296 contacts (-29.4/contact) +
2D Compatibility (PS) -6263 + (NN) -2172 + (LL) 10660
1D Compatibility (HY) -2800 + (ID) 300
Total energy: -9573.0 ( -32.34 by residue)
QMean score : 0.493
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