Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEAIERRDDDMTIVSFEVEISAPIQEVFALLTTNTGLAKWFNELE------VGELGADGYLLFVMTPE---EKITMPIRAFEPNQKLAFEWDQ-------------DEVAFELNEITANKTRLTFTEQLTTITE----HSPRDISGWHICLKKLQASAEGKIYDFNKTEFKTLFAKYQKELNIEK
2L9P Chain:A ((4-158))
--------EKKKNKIIFTRTFSAPINKVFDAYTKRELFEQWFHPQDASVTVYDFNATKGGSAFYAIQAPQMISYTIAEYLQVDAPYYIEYLDYFATSKGEKDTSMPGMHITLNFEEVK-GKTTVTSTSTFPTESAAQQAIDMGVETGMNSTLNQLEKLLNQKLE----------------------
General information:
TITO was launched using:
RESULT:
Template:
2L9P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56104 for 827 contacts (-67.8/contact) +
2D Compatibility (PS) -13666 + (NN) -2103 + (LL) 2836
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: -73287.0 ( -88.62 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_2L9P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L9P-query.scw
PDB file :
Tito_Scwrl_2L9P.pdb
: