Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEKSSIYGLTWTNLTEWLEAHGQKKFRATQVWDWLYRKRVKTFEEMSNVPKETIELLTANFVMNTLEEQVVQESTDGTTKYLFKLSDGNLIETVMMKQEYGLSVCVTTQVG-----CNIGCTFC------ASGLLKKSRDLTAGEIVEQIMNVQHYL--------DGRNLEE--RVSHVVVMGIGEPFDNYDNVMDFLRVINHDKGLAIGARHITVSTSGLAPRIIDFANEDFQ--VNLAISLHAPNNELRTSIMRINKTYSIEKLMEAIHYYVNKTNRRITFEYIMLKGVNDHKKEALELAALLGEHRHLAYVNLIPYNPVDEHIDYERS-TKEDVLAFYDTLKKNGINCVIRREHGTDIDAACGQLRSKQIKRVGVRERMKQKQAAAEE |
2YX0 Chain:A ((11-342)) | --KITV---------------QANPNMPKEVAELFRKQHYEIVGRHSGVK-------LCHWLKKSLTEG----------------------RFCYKQKFYGIHSHRCLQMTPVLAWCTHNCIFCWRPMENFLGTELPQPWDDPAFIVEESIKAQRKLLIGYKPKVDKKKFEEAWNPTHAAISLSGEPML-YPYMGDLVEEFHKRGF------TTFIVTNGTIPERLEEMIKEDKLPTQLYVSITAPDIETYNSVNIPMIPDGWERILRFLELM-RDLPTRTVVRLTLVKGENM--HSPEKYAKLILKAR----PMFVEAKAYMNRLTINNMPSHQDIREFAEALVKHLPGYHIEDEYEPS-RVVLIMRDDVDPQGTGVEGRFIKH------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2YX0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -100762 for 2449 contacts (-41.1/contact) +
2D Compatibility (PS) -31503 + (NN) -6944 + (LL) 5876
1D Compatibility (HY) -6800 + (ID) 2700
Total energy: -142833.0 ( -58.32 by residue)
QMean score : 0.388
|
|
|