Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKRQTKFCKESLVIKTSRVFPSDTNNHNTLFGGRLMTYIDDTASISASRHCRTEIVTASTDSVDFLKPIKNDHSVCLESYVASTGRSSMEIFVKIIAENLKTG-ERYLAATSFLTFVALGADGKTVEVPLVEPETEEQKRIHAGAEARSIARKIRLKENQSLAESLSTDIPW
2EIS Chain:A ((3-123))
------------ETRMVYPVFPGETNHYGTLFGGTVLAWMDQAAFVAATRHARKKVVTVHADAVDFKRPVPLGAIVELVARLKEVGRTSMRVEVEMWVEPVKEGEEAYLAARGGFVLVAVDERGRPSPVPPLE----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2EIS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74076 for 879 contacts (-84.3/contact) +
2D Compatibility (PS) -13137 + (NN) -2417 + (LL) 4144
1D Compatibility (HY) -8000 + (ID) 2200
Total energy: -95686.0 ( -108.86 by residue)
QMean score : 0.328
(partial model without unconserved sides chains):
PDB file :
Tito_2EIS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EIS-query.scw
PDB file :
Tito_Scwrl_2EIS.pdb
: