Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEKKIRTVLGDISKESLGFTYSHEHLWCCPPSVQKDRDFELTDYESSLEELKTFQSIGGQTLVDASTLDYGRDGNKLKTMSEESGVNVLGVTGFNKHIYFPDWVQEESIEQITDRLIYDIEKGMDGSDARAGILKSGSWYN-LIHPLENKVTRAVAWAQKETGAPIWLHTEAGTMGQEMLAILEEEGVNMELVAVGHSDRNADPYYHLKLAEKGAYVQFDGCGKVKYYPDSTRVELVKNMLENGFGDKLLISGDMGRKSYLHAYGGGPGFRFIKTKFIPRLLEEGVTEQQIQTIFYDNPANWLAKF |
1BF6 Chain:A ((2-291)) | -------------FDPTGYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGYYQDAFFPEHVATRSVQELAQEMVDEIEQGIDGTELKAGIIAEIGTSEGKITPLEEKVFIAAALAHNQTGRPISTHTSFSTMGLEQLALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGKNSYYPDEKRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGG-YGYDYLLTTFIPQLRQSGFSQADVDVMLRENPSQFFQ-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103291 for 2579 contacts (-40.1/contact) +
2D Compatibility (PS) -31376 + (NN) -14268 + (LL) 1116
1D Compatibility (HY) -20400 + (ID) 4700
Total energy: -172919.0 ( -67.05 by residue)
QMean score : 0.452
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