Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNKKIL-FGTGLAGVGLLAAAGYTLTKKVTDYKRQQITQTLREFFSQMGDIQVFYFNEFESDIKMTSGGLVLEDGRIFEFIYRQGVLDYVEVSK
2CUL Chain:A ((2-22))
-AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGLRPLHLFQATATGLL
General information:
TITO was launched using:
RESULT:
Template:
2CUL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3415 for 66 contacts (-51.7/contact) +
2D Compatibility (PS) -2031 + (NN) 167 + (LL) 208
1D Compatibility (HY) -400 + (ID) 200
Total energy: -5671.0 ( -85.92 by residue)
QMean score : 0.230
(partial model without unconserved sides chains):
PDB file :
Tito_2CUL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CUL-query.scw
PDB file :
Tito_Scwrl_2CUL.pdb
: