Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVTVEKNRAVTFQANKELVSEAMTVLNKKNLTLSSALRLFLQNVVVTNEVDLLTEEELEKEKLFKQFQAEISKNIEDVRQGKFYTSEEVRAELGL
2K1O Chain:A ((21-63))
----KRNFSVTFYLSKEEHDVLRRLADEEVESVNSFVKRHILKTIIYKKGTNQDSSIN-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2K1O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13052 for 192 contacts (-68.0/contact) +
2D Compatibility (PS) -4517 + (NN) -1992 + (LL) 3924
1D Compatibility (HY) 0 + (ID) 350
Total energy: -15987.0 ( -83.27 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_2K1O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K1O-query.scw
PDB file :
Tito_Scwrl_2K1O.pdb
: