Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNQFILTGGWSWYNNLVSQVPAGKLFSWKAVLDAIPSILERLPITLLLTVAGALFGLILALIFAVVKINRVKILYPIQALFVSFLRGTPILVQLMLSYYGIPLFLKFLNQKYGFDW-NINAIPASVFAITAFAFNEAAYTSETIRAAILSVDQGEIEAARSLGMTSAQVYRRVIIPNAAVVATPTLINTLIGLTKGTSLAFNAGIVEMFAQAQIMGGSDYRYFERYISVA--------LVYWAVSFLIEQLGNAIERKMAIKAPRHLTDEIPGGVR |
| 2VQ2 Chain:A ((4-223)) | ANQVSNIKTQLAMEYMRGQ-------DYRQATASIEDALKSDP--------------------------KNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPT----PYIANLNKGICSAKQGQFGLAEAYLKRSLAAQ-----------------PQFPPAFKE-LARTKMLAGQLGDADY-YFKKYQSRVEVLQADDLLLGWKIAKALGNAQAAYEYEAQLQANFPYSEELQTVLT |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VQ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140338 for 1682 contacts (-83.4/contact) +
2D Compatibility (PS) -21611 + (NN) 265 + (LL) 5560
1D Compatibility (HY) -1200 + (ID) 1850
Total energy: -159174.0 ( -94.63 by residue)
QMean score : 0.229
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