Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNKKNNYDLMYFIPLVFLIYPIGGILYYHYPFWTLFFTLAFVGAYLYSVIIRGESKYHMIAWSTMLTYIFYMTIFINSGFIWYIYFLSNLLVYRFRDKLKSFRFISFACTLATVVFLCFFKASDFGDRIMFLIVPIFCIGYMWIAIENRNSEEQREKIAEQNQYINILSAENERNRIGRDLHDSLGHTFAMMTLKTELALKLLEKRNYDKVQKELSELNHISHQSMSEVRQIVSNLKY-----------RTVVEEIDEL----YRLFQLSNIKLTVVNKLETSQLSPVTQSTITMILKELSNNIVKHAEAD----SVELSLVRQGATINIEMIDNGCGFTN--------------LDGDEFHSIQERLTIVEGTLTILSRSK-PTHIQVVLKEV |
| 2C2A Chain:A ((18-247)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------RMKTEFIANISHELRTPLTAIKAYAETIYNSLGELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAPDKYVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVD-TGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKD |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2C2A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -55465 for 1249 contacts (-44.4/contact) +
2D Compatibility (PS) -20530 + (NN) -9640 + (LL) 16164
1D Compatibility (HY) -10400 + (ID) 1300
Total energy: -81171.0 ( -64.99 by residue)
QMean score : 0.458
|
|
|