Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANDWKKSARGLALMTLEEVFDKGAY----SNIALNKSLKKSRLS-DKDRALVTEIVYGTVARKITLEWYLSHFIV-DRDKLELWVYHLLLLSLYQLLYLDNIPDHAIVNDAVTIAKNRGNK---KGAEKLINAVLRRVSSETLPEIASIKRQNKRYSVAYSMPVWLVKKLIDQYGETRALAIMESLF-ERNKASLRVTDLS-QKQTIKETLN-----VRDSHIAETALVADS-GNFASTSFFQDGLITIQDESSQLVAPTLKVSGNDQVLDACSAPGGKTSHIASYLT-TGAVTALDLYDHKLELVMENAKRLGLSDKIKTKKLDASKAHEYFLEDTFDKILVDAPCSGIGLIRRKPDIKYNKANQDFEALQEIQLSILSSVCQTLRKGGIITYSTCTIFEEENFQVIEKFLENHPNFEQVELSHTQEDIVKRGCISISPEQYHTDGFFIGQVKRIL |
| 2YXL Chain:A ((6-448)) | ----KKLSIPPKGIRAIIEAIRLGEIIKPSQYAKRE-AFKKHDVEEAWLNRVLTMIFYDIMKKQGLIDKVIKEIVGVTPLILDPWLRAALRVAVDIALFHD-PSSQTIKNLRWKASD-FISSRTHPYVGMYFWDLLDKIFEYKPN----PKNELEELEWKYLAPSWLIERVKGILGDE-TEDFFRSVNKRHEWISIRVNTLKANVEEVIGELEEDGVEVVRSERVPTILKIKGPYNFDTSSAFNEGKIIVQEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKI-VKPLVKDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVHPEFKLVPLKSPYDPGFLEGTMRAWPHRHSTIGFFYALLEK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YXL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -178963 for 3623 contacts (-49.4/contact) +
2D Compatibility (PS) -44903 + (NN) -18902 + (LL) 1068
1D Compatibility (HY) -20000 + (ID) 5150
Total energy: -266850.0 ( -73.65 by residue)
QMean score : 0.414
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