Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKHHYFLAF-FYGSVIIFAICFVIIDSLGVNLVHLYQTSRLWLIEQ-LIFSIFFLSLAVTILLLLTWFLLDDNSKRQI-NHNLRRILNNQSINVTDDGTEISTNIQRLSKK-MNLMTASLQSKENSRILKSQEIV-KQERKRIARDLHDTVSQDLFAASMVLSGIAQNVSQLDVDQVGSQLLAVEEMLQHAQNDLRILLLHLRPVELENKTLSEGFKMILKEL-TDKSDIEVVYHE-SILT-LPKKIEDNIFRIGQEFIS---NTLKHSQASRLEVYLNQTENELQLKMIDNGIGFDMDSVYDLSYGLKNIEDRVE----------DLAGNLQLLSQPDK---GVAMD---IRLPLVNQNEDKNG |
| 1T9K Chain:A ((5-344)) | LKT-----KTMEWSGNSLKLLDQRKLPFIEEYVECKTHEEVAHAIKEMIVRGAPAIGVAAAFGYVLGLRDYKTGSLTDWMKQVKETLARTRPT---------AVNLFWALNRMEKVFFENADRENLFEILENEALKMAYEDIEVNKAIGKNGAQLIKDGSTILT--HCNAGALATVDYGT-ALGVIRAAVESGKRIRVFADETRP-------YLQGARLTAWELMKDGIEVYVITDNMAGWLMKRGLI--DAVVVGADRIALNGDTANKIGTYSLAVLAKRNNIPFYVAAPVSTIDPTIRSGEEIPIEERRPEEVTHCGGNRIAPEGVKVLNPAFDVTENTLITAIITEKGVIRPPFEENIKKILE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T9K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103506 for 2766 contacts (-37.4/contact) +
2D Compatibility (PS) -33180 + (NN) -8824 + (LL) 1480
1D Compatibility (HY) 1600 + (ID) 1900
Total energy: -144330.0 ( -52.18 by residue)
QMean score : 0.196
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