Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIQEIKDLMTQFDESSLREFSFKTSDGELSFSKNEGKAPLVPTMSPMSHQPEATPTIATPVSNEAGEQTKQATEVVSEIPESTVTVAEGDVVESPLVGVAYLASGPDKPNFVSVGDSVKKGQTLMIIEAMKVMNEVPAPHDGVVTEILVANEEVIEFGKGLVRIK
3BG5 Chain:D ((1116-1169))
----------------------------------------------------------------------------------------------------------------VSVGETVKANQPLLITEAMKMETTIQAPFDGVIKQVTVNNGDTIATGDLLIEIE
General information:
TITO was launched using:
RESULT:
Template:
3BG5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31594 for 265 contacts (-119.2/contact) +
2D Compatibility (PS) -5468 + (NN) 4179 + (LL) 6036
1D Compatibility (HY) -4800 + (ID) 1200
Total energy: -32847.0 ( -123.95 by residue)
QMean score : 0.324
(partial model without unconserved sides chains):
PDB file :
Tito_3BG5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BG5-query.scw
PDB file :
Tito_Scwrl_3BG5.pdb
: