Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNTETIYKLILKDGLRQIKFKNSHLKLVSSAEEGKRGAIFAYRSKANMIKARGLVLTSMEAVSENQDSFTHWTPNVYRYGSYSDSKRQITRGHSEDNLRQVNTFYIDFDITSSAEEMTSGDILTAAIDLGFMPTLILKSDKGYQAYFVLSEPAYVTSHSQFRVVKVAKAISQNLRNYFSQTLPVDMTCNHFGIARMPRTDNIEFFHADYTYSFQEWLDWSMKQSDIPFPSKKPNLTVISGSEGVKQVDEPWYGLLMREANIKGDKA-LMGRNNVLFTLALANF--SSGVSQSDCEVVLADFNEHLAEPLSQDEFLKVIYSAYSGKYEAANRDYIKLLCKAWVNENLRNSDLFIKQRWYKFKKNRANRKNSHLHEWKADVMAYLEGYFQSDDPFIQTTKKAIREELNIPERSLDKVLKALKADNKIFFAVKSGRGGGIRLTSVKAIVLSLIQVKKERQEAYFANVAAFFEESLGFIKRVIEGVKSGLKQAKQLSLFEADIG |
4D10 Chain:B ((34-447)) | --VDLENQYYNSKALKEDDPKAALSSFQKVLELEGEKGEWGFKALKQMIKINFKLTNFPEMMNRYKQLLTYIRSAV-------------TRNYSEKSINSILDYISTSKQMDLLQEFYETTLEA------------LKDAKNDRLWFKTNTKLGKLYLER----EEYGKLQKILRQLHQSCQTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHI-------KSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSGINP---------FDSQEAKPYKNDPEILAMTNLVSAYQN---NDITEFEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIK-----------------PYTRIHIPFISKELNIDVADVESLLVQCILDNTIH---------GRIDQVNQLLELD----HQKRGGARYTALDKWTNQLNSLNQAVVSKLA----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D10.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 18952 for 2879 contacts (6.6/contact) +
2D Compatibility (PS) -41373 + (NN) -6497 + (LL) 7000
1D Compatibility (HY) -5200 + (ID) 3400
Total energy: -30518.0 ( -10.60 by residue)
QMean score : 0.201
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