Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFIPFKKSNKCV-VTDELFLEVTWEDGKPPEDDSELLGIIEGLEQQYLDSFQHSIEESLPYMTFQQAELLFQSLKDAYGHFQLKKVAICHLEGKQAVSEGE---------VFASP------FIIDSRYQNLLLPLIQSIMIGPDFQSYTY-------QEKREYFVNQIYPAYKVSLGIQESALPLF-PEEGEQIPLDNTFVANRR-VASIPTTSSEPRKPNSSFSLKKVYLLMGFLATLA-----AGAMVSSVSLHAELSKQQ-EQVNYLYQEWKDIQNLSDKEHQIDVFSR--YFLPNYYSGKKENLSDFLSDGDAKYTVPKEGSLQSVILEKVTYDAKTKHYQLTYVLTIKAKEQLTSVRLEFEVKEQPSRKYGYVVTSEPKETPYLMKN |
| 4B3X Chain:A ((1-363)) | MAKVRIYQLAKELGMETQELLELLDQMGVAYKSHASTLEEKDAEAVRELVKEQRGLQEKLAEEERRKSLPRRPPVVVIMGHVDHGKTTLLDYLRKSRIAEKEGGGITQHVGAFEVKTPQGTVVFIDTPGHEAFTTIRQRGAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAKLIFAINKIDLPQADPEKVKRQLMERGFVPEEYGGDAIVIPIS----AKTGQGVQDLLEMILLLAELEDYRADPNAEPRGVILESKLDKQAGIIANMLVQE--------------GTFRVGDYVVAGEAYGRIRAMMD--ADGNQRKEAGPGSAVQVLGFQELPHAGD----VVEWVPDLEAAKEIAEERKEERKAREEEEK-----ARRPRTMAELLR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B3X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7749 for 2370 contacts (3.3/contact) +
2D Compatibility (PS) -34650 + (NN) -6407 + (LL) 2000
1D Compatibility (HY) -5600 + (ID) 3000
Total energy: -39908.0 ( -16.84 by residue)
QMean score : 0.035
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