Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------------------------------MSKSQTDYFSDDLMADALQAENYLR-QSYTCPLQTIQRGIEQGLQSYLERYRLASPQLKFQIFLFSNFYGEKMKYLLEEGEGEFHV----------------------------- |
| 4U6N Chain:A ((8-200)) | NVQERIKACFTESIQTQIAAAEALPDAISRAAMTLVQSLLNGNKILCCGNGTSAANAQHFAASMINRFETERPSLPAIALNTDNVVLTAIANDRLHDEVYAKQVRALGHAGDVLLAISTRGNSRDIVKAVEAAVTR--------DMTIVALTGYDGGELAGLLGPQDVEIRIPSHRSARIQEMHMLTVNCLCDLIDNTLFP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U6N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 385 for 550 contacts (0.7/contact) +
2D Compatibility (PS) -8084 + (NN) -1912 + (LL) 640
1D Compatibility (HY) -4400 + (ID) 600
Total energy: -13971.0 ( -25.40 by residue)
QMean score : 0.100
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