Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQKNNRLGYFGRQKQAFDDYVFLTKAKMKAERDYFASEGESDPERLAAQKARDQEFLKSLKKVGIGFIAFLLFYAIVRTVLGLW
3GXQ Chain:A ((2-54))
------NSVFFGKKKKVSLH--LLVDPDMKDEIIKYAQEKDFDN----VSQAGREILKKGLEQIA--------------------
General information:
TITO was launched using:
RESULT:
Template:
3GXQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 21718 for 242 contacts (89.7/contact) +
2D Compatibility (PS) -5970 + (NN) -4963 + (LL) 3452
1D Compatibility (HY) -2000 + (ID) 650
Total energy: 11587.0 ( 47.88 by residue)
QMean score : 0.292
(partial model without unconserved sides chains):
PDB file :
Tito_3GXQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GXQ-query.scw
PDB file :
Tito_Scwrl_3GXQ.pdb
: