Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIANQTIVDIVTQVVTPAIQAPFELVDVEYEKMGGDYVLSILIDKPGGITVEDTAQLTDVVSPLLDTIQPDPFPEQYMLEVSSPGLERPLKTAEALSNAVGSYINVSLYKSIDKVKIFEGDLLSFDGE-TLTIDYMDKTRHKTVDIPYQTVAKARLAVKL
3JB9 Chain:E ((4-39))
---------------------------------------------------------------------------------------------TKMVSLLNHSLNVTTKD----GRTFVGQLLAFDGFMNLVLSDCQEYRHEEKRMLGLVILRGEFIVSL
General information:
TITO was launched using:
RESULT:
Template:
3JB9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16952 for 150 contacts (-113.0/contact) +
2D Compatibility (PS) -3539 + (NN) 833 + (LL) 6612
1D Compatibility (HY) -2000 + (ID) 500
Total energy: -15546.0 ( -103.64 by residue)
QMean score : 0.364
(partial model without unconserved sides chains):
PDB file :
Tito_3JB9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JB9-query.scw
PDB file :
Tito_Scwrl_3JB9.pdb
: