Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNSEKVLNLIGLAQRAGRLITGEELVIKAIQNQQVSLIFLANDAGPNL-TKKVTDKSNYYKTEVSTVFSTLELSDALGKP--RKVVAVADAGFSKKMRTLMA
2AIF Chain:A ((22-116))
-DLNNKIINLVQQACNYKQLRKGANEATKALNRGIAEIVLLAADAEPLEILLHLPLVCEDKNTPYVFVRSKVALGRACGVSRPVIAAAITSKDGSSLSSQITE
General information:
TITO was launched using:
RESULT:
Template:
2AIF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46956 for 674 contacts (-69.7/contact) +
2D Compatibility (PS) -10004 + (NN) -4036 + (LL) 208
1D Compatibility (HY) -1600 + (ID) 1050
Total energy: -63438.0 ( -94.12 by residue)
QMean score : 0.664
(partial model without unconserved sides chains):
PDB file :
Tito_2AIF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AIF-query.scw
PDB file :
Tito_Scwrl_2AIF.pdb
: