Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQETTKSIFPKGEKNPYGEFFIGQSYLAALAKSPDGNVSVGN-VTFEAGCRNNWHVHLDGYQILLVTEGSGWYQEEGKEAVSLKPGDVIVTDKGVRHWHGAKKDSEFAHIAI---TAGKS-EFYEAVSDEKYSKLG
4UXA Chain:T ((17-131))
------------------DWFTGTVRIDPLFQAPDPALVAGHSTTFEPGARTAWHTHPLG-QTLIVTAGCGWAQREGGAVEEIHPGDVVWFSPGEKHWHGAAPTTAMTHLAIHERLDGKAVDWMEHVTDEQYRR--
General information:
TITO was launched using:
RESULT:
Template:
4UXA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13775 for 751 contacts (-18.3/contact) +
2D Compatibility (PS) -11787 + (NN) -2077 + (LL) 624
1D Compatibility (HY) -4800 + (ID) 2250
Total energy: -34065.0 ( -45.36 by residue)
QMean score : 0.419
(partial model without unconserved sides chains):
PDB file :
Tito_4UXA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UXA-query.scw
PDB file :
Tito_Scwrl_4UXA.pdb
: