Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLESLKTIVKTNSDK-KLFDGD-----LQVSYGEFYNLVRQDM-------ASQDNRKHVISTHSLLNQLVRFVSKLCQKALPIICKPNLTHNEISRLEKE--------------------------------------------------------VQYAPQLADFGVLSSGTTADAKLLWRSFASWSDFFSIQNAYFSVTSNSRLFIQGDFSFTGNLN-LVLSLLLLGGTLVV--TQKNSVKYWQTLWEKTGVTHLYLLPSYLKLVEQYSKE--TALDNKTIITSSQYVSDSLLEGLYIKHPKVSVKIFYGASELNYVSWYDGRDIRDKPQYVGEIVPNVAVRIKE-----------GRIFVK-----TPYSICGL------------SSEYCAGDYGELI-DGKLYLFGRGDDWCNQSGIKLYLPRLIEKIKTCPYIKDAVAFTKESQSHGQESHCCIVLIEN-------QMQQECLKWLSEHFEKKYGFKHYHIVSKIPLMPSGKIDYQQLKRQLA |
| 3C5E Chain:A ((54-559)) | ---------GKRPPSPALWWVNGKGKELMWNFRELSENSQQAANVLSGACGLQRGDRVAVVLPRVPEWWLVILGCIRAGLIFMPGTIQMKSTDILYRLQMSKAKAIVAGDEVIQEVDTVASECPSLRIKLLVSEKSCDGWLNFKKLLNEASTTHHCVETGSQEASAIYFTSGTSGLPKMAEHSYSSLGLKAKMDAGWTGLQASDIMWTISDTGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQDLSSYKFPHLQNCVTVGESLLPETLENWRAQT-GLDIRESYGQTETGLTCMVSKT-MKIKPGYMGTAASCYDVQIIDDKGNVLPPGTEGDIGIRVKPIRPIGIFSGYVDNPDKTAANIRGDFWLLGDRGIKDEDGYFQFMGRADDIINSSGYRIGPSEVENALMEHPAVVETAVISSPDPVRGEVVKAFVVLASQFLSHDPEQLTKELQQHVKSVTAPYKYPRKIEFVLNLPKTVTGKIQRAKLRDKEW |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C5E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -237051 for 3213 contacts (-73.8/contact) +
2D Compatibility (PS) -42672 + (NN) -14064 + (LL) 932
1D Compatibility (HY) -12000 + (ID) 3100
Total energy: -307955.0 ( -95.85 by residue)
QMean score : 0.492
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