Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKIISLGEVLLRLSPPQYHTLMQANHLKCQFGGSELNVLASLAQLGHHVGLVSALPDNDLGKMARQFILSQQISPAAIIK-KEGRLGIYYYEQGFSVRTNKVIYDRNYSSFWESTLSDYDFTSIFKGVDWFHVSGITPALTKDLYEVTRFLMTKAKEGGVKVSIDLNFRESLWSSFQEAREQLSPLLGLLDVCFGLEPIYLAGESEDLKDELGLSRPYLDIELLEKITQKIVQEYGLDYIAFTQREMEYTNQYMLKSYLYHNNMLYQTDKTGVEVLDRVGTGDAFAAGLIHALLEKE-----TPQRALEIAMATFKYKHTIQGDINIMTR-DDIAYLIEKETNDIKR |
| 1TYY Chain:A ((25-328)) | -NKVWVIGDASVDLVPEKQ------NSYLKCPGGASANVGVCVARLGGECGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAVLIVN--------SFTYLVHPGADTYVSPQDLP---PFRQYEWFYFSSIGLTDRP-AREACLEGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSAD--------ELCQLSGASH-------WQDARYYLRD-LGCD-----TTIISLGADG---ALLITAEGEFHFPAPRVDVVDTTGAGDAFVGGLLFTLSRANCWDHALLAEAISNANACGAMAVTAKGAMTALPFPDQLNTFLS-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TYY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111794 for 2648 contacts (-42.2/contact) +
2D Compatibility (PS) -30778 + (NN) -6267 + (LL) 4116
1D Compatibility (HY) -8000 + (ID) 3050
Total energy: -155773.0 ( -58.83 by residue)
QMean score : 0.451
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