Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLYPLLTKTRNTYDLGGIWNFKLGEHNPNE-------LLP--SDEVMVIPTSFND-LMVSK-------EK---------------RDYIGDFWYEKVIEVPKVSEDEEMVLRFGSVTHQAKIYVDGVLVGEHKGGFTPFEVLVPECKYNNEKIKVSICANNVLDYTTLPVGNYSEIIQEDGSIKKKVRENFDFFNYAGVHRPLKLMIRPKNHIFDITITSRLSDD---LQSADLHFLVETN-QKVDEVRISVFDEDNKLVG---------E-T--KD-SRLFLSDVHLWEVLNAYLYTARVEIFVD-NQLQDVYEENFGLREIEVTNGQFLLNRKPIYFKGFGKHEDTFINGRGLNEAANLMDLNLLKDIGANSFRTSHYPYSEEMMRLADRMGVLVIDEVPAVGLFQNFNASLDLSPKDNGTWSLMQTKAAHEQAIQELVKRDKNHPSVVMWVVANEPASHEAGAHDYFEPLVKLYKDLDPQKRPVTLVNILMATPDRDQVMDLVDVVCLNRYYGWYVDHGDLTNAEVGLRKELLEWQDKFPDKPIIITEYGADTLPGLHSTWNIPYTEEFQCDFYEMSHRVFDGIPNLVGEQVWNFADFETNL-M----------IL-----RV---QGNHKGLFSRNRQPKQVVKEFKKRWMTIPHYHNKKNSVK |
| 3BGA Chain:A ((45-623)) | --------SPYYMSLNGKWKFNWVKNPDNRPKDFYQPSYYTGGWADINVPGNWERQGYGTAIYVNETYEFDDKMFNFKKNPPLVPFAENEVGSYRRTFKVPADWKGRRVVLCCEGVISFYYVWVNGKLLGYNQGSKTAAEWDITDVLSEG-ENVVALEVYRWSSGA-YL-------------------ECQDMWRLSGIERDVYLYSTPKQYIADYKVSASLDKEKYKEGIFNLEVTVEGPSATASSIAYTLKDASGKAVLQDAINIKSRGLSNFIAFDEKKIAEVKAWNAEHPNLYTLVLELKDAQGKVTELTGCEVGFRTSEIKDGRFCINGVPVLVKGTNRHEHS-QLGRTVSKELMEQDIRLMKQHNINMVRNSHYPTHPYWYQLCDRYGLYMIDEANIESHGMG--------YGPASLAKDSTWLTAHMDRTHRMYERSKNHPAIVIWSQGNEAGNG-----INFERTYDWLKSVEK-GRPVQYERAEL--------NYNTDIYCRM-YRSVD-----------EIKAYVG--KK-DIYRPFILCEYLHAMGNS--------------CGGMKEYWEVFENEPMAQGGCIWDWVDQNFREIDKDGKWYWTYGGDYGPEGIPSFGNFCGNGLVNAVREPHPHLLEVKKIYQNIKATLSDRKNLK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3BGA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -191628 for 4260 contacts (-45.0/contact) +
2D Compatibility (PS) -54160 + (NN) -8324 + (LL) 5272
1D Compatibility (HY) -14000 + (ID) 5550
Total energy: -268390.0 ( -63.00 by residue)
QMean score : 0.397
|
|
|